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Solid tumours · Exome / WES

Twin Exome. A whole-exome route for solid-tumour analysis.

Whole-exome sequencing examines the protein-coding regions of the genome, giving the broadest molecular input to the Twin.

Overview

What this pathway is

OnKommon Twin · Twin Exome

Whole-exome sequencing (WES) across every protein-coding gene.

Twin Exome uses whole-exome sequencing (WES), which reads the protein-coding regions of the genome — roughly 1–2% of the DNA, where many known cancer-relevant changes occur.

Intended audience and use

Who it is for

People with solid tumours whose treating team wants the broadest molecular view of the tumour.

Sample and testing pathway

Sample and what is generated

Sample
Tumour tissue — FFPE or fresh.
Information generated
Integrated analytical features — SNVs and indels, CNVs, gene fusions, TMB, MSI, HRD, HLA typing and pharmacogenomics — across every protein-coding gene.

From result to Twin

How the information enters Twin

Exome-scale data give the analytical layers the most to work with: CloneTrace and SigPrint in particular depend on having enough mutations. Findings then pass through evidence layers such as AccessMatch, ResistMap and TrialGraph and are placed in clinical context.

Analytical layers most relevant to this route

  1. 01 · Baseline — Day 0

    Integrate the data. Build the Twin.

  2. 02 · During months 0–6

    Review new findings inside the workflow.

  3. 03 · End of month 6

    Review the evidence. Set the next pathway.

  4. 04 · After six months

    Twin tracks

Strengths

Why this route

  • The broadest view: every protein-coding gene, not a preselected list.
  • Enough mutations for CloneTrace and SigPrint to reconstruct the tumour's history and signatures.
  • The same exome powers OnKommon AVATAR when a biological investigational plan is needed.

How every finding is interpreted, from detection to decision

Deliverables

What you receive

  • A structured Twin report in the five documented components: executive molecular summary, molecular findings, treatment options to evaluate, clinical-trial matches and a longitudinal view.
  • Review and sign-off by the treating oncologist, within the KPCIRC sign-off process.
  • Entry into the six-month Twin journey, with the option to continue into a Twin track afterwards.

The treating oncologist owns every decision. Every Twin report is reviewed and signed by the treating oncologist, then taken to KPCIRC's Molecular Tumour Board.

KPCIRC sign-off process

Questions

Frequently asked questions

How is Twin Exome related to AVATAR?
They are different offerings. Twin Exome feeds the longitudinal Twin. AVATAR also starts from whole-exome sequencing, then runs the OnKommon Interpreter and builds a fruit-fly model for candidate-drug screening.
Does whole-exome sequencing find inherited variants?
Exome data can contain inherited variants. Any with clinical significance are flagged for confirmation and genetic counselling.
Is broader always better?
The right route depends on the clinical question and the sample. WES gives the widest view; your treating team chooses.

Other Twin pathways

Discuss Twin Exome for a specific clinical question.

Continue the journey

The 21 analytical layers

Step inside every layer.

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